BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C03LP1|AL425657
(762 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig984 1483 0.0
>3x_Contig984
Length = 4208
Score = 1483 bits (747), Expect = 0.0
Identities = 759/763 (99%), Gaps = 1/763 (0%)
Strand = Plus / Plus
Query: 1 atctaaccgtacttcaagctgcatcagttatcaagacgaccaaggaaagaaaaatgctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3084 atctaaccgtacttcaagctgcatcagttatcaagacgaccaaggaaagaaaaatgctaa 3143
Query: 61 ttaaaacacaatcaagtaatgtaatttccaaaactataaaactgacacttttttttcgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3144 ttaaaacacaatcaagtaatgtaatttccaaaactataaaactgacacttttttttcgtg 3203
Query: 121 gtccccattgaaaatctacccatatctaaactctatacatgcattaagtaccgtatccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3204 gtccccattgaaaatctacccatatctaaactctatacatgcattaagtaccgtatccgt 3263
Query: 181 taaaacttcttttcgttcgagacgaaacttcgcgttttgcttctctctcgacaccgttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3264 taaaacttcttttcgttcgagacgaaacttcgcgttttgcttctctctcgacaccgttaa 3323
Query: 241 atcaacgaaaaaacgggaaagaaaaagttacactatttcgtgatttcgcagtcgcagcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3324 atcaacgaaaaaacgggaaagaaaaagttacactatttcgtgatttcgcagtcgcagcat 3383
Query: 301 gtcacatggtatatagatccggtatacgtctgactagtttacttattgtgtgcatacatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3384 gtcacatggtatatagatccggtatacgtctgactagtttacttattgtgtgcatacatt 3443
Query: 361 gtcacacctctaattccatgcactgttttatcgttccgatggttgcactggtctggatcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3444 gtcacacctctaattccatgcactgttttatcgttccgatggttgcactggtctggatcg 3503
Query: 421 aatcggtaccacctcttgagatcgaatattcgatatcacttagtctagatagaagttcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3504 aatcggtaccacctcttgagatcgaatattcgatatcacttagtctagatagaagttcaa 3563
Query: 481 ttctggtttgaggtttcagttcatattgttccagtaggcccgcgatcccctcaatcatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3564 ttctggtttgaggtttcagttcatattgttccagtaggcccgcgatcccctcaatcatgt 3623
Query: 541 caataagtgctaagccctttgtgattctgattttgttcacggtgtatgtagtggtagtcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3624 caataagtgctaagccctttgtgattctgattttgttcacggtgtatgtagtggtagtcc 3683
Query: 601 agtcgtccttgagaattgattccagcatggtttcaaggtcacgtgggtgaggtgcaccga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3684 agtcgtccttgagaattgattccagcatggtttcaaggtcacgtgggtgaggtgcaccga 3743
Query: 661 tgcattcgtagatcaaatcctcggtgacttcttctgtgtyaggattgtctagcgtmtct- 719
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 3744 tgcattcgtagatcaaatcctcggtgacttcttctgtgtcaggattgtctagcgtagctc 3803
Query: 720 ttgctgcctgtagtacgttcaatgctcgtctcatgtcaccgga 762
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3804 ttgctgcctgtagtacgttcaatgctcgtctcatgtcaccgga 3846
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4957
Number of Sequences: 1807
Number of extensions: 4957
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 762
length of database: 10,358,551
effective HSP length: 16
effective length of query: 746
effective length of database: 10,329,639
effective search space: 7705910694
effective search space used: 7705910694
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)